Job Specifications
Your role
The role will work across the technical stack to support scaling and automation of deposition and presentation systems for high volumes of biological image data. You will extend and build on the EMBL-EBI imaging resources’ to enable better automation, integrate with high performance computing and storage resources and develop/implement new functionality.
Specific Responsibilities
Design and implement systems to support rapid deposition, curation and archival of biological image data, including back-end, front-end and supporting infrastructure.
Develop systems for interactive online exploration of biological image data, working with existing tools, extending these, and developing new solutions as appropriate
Act as liaison between the BioImage Archive/EMPIAR and EMBL-EBI's compute/storage infrastructure teams to deploy and manage these systems.
Coordinate with other service teams on shared development and process implementation.
Contribute to the broader team activities, including helpdesk support, planning, design review and improvement of the team's software development processes.
You have
You should have a university degree in computer science, life sciences or a related discipline and have several years' experience in a software development capacity.
Substantial experience developing full stack applications
Extensive hands-on experience with Javascript and Python
Working with relational databases such as PostGres or MySQL
Software development lifecycle, including design, implementation, testing, continuous integration, deployment and version control
Working with Linux systems
Personal Attributes
A strong affinity with, and enthusiasm for, the goal of EMBL-EBI to provide world-class open data and services to the global community
A strong desire to learn new skills and technologies
Excellent communication and interpersonal skills
The ability to work both independently and as part of a team
You may also have
Experience designing data systems that operate at scale
Experience working with BioImaging data from one or more modalities
Experience with NoSQL databases, such as MongoDB
Experience with batch scheduling systems such as SLURM
Experience with containerisation (e.g. Docker) and container orchestration (e.g. Kubernetes)
Infrastructure-as-code deployment tools such as Ansible or Terraform
Salary: Grade 5 or 6 depending on qualifications and experience,
monthly salary at £3,229 or £3,612 after tax but excluding pension and insurance contributions. Plus generous benefits.
Contract Length: 3 year contract - Project based
Why join us
Do something meaningful
At EMBL-EBI you can apply your talent and passion to accelerate science and tackle some of humankind's greatest challenges. EMBL-EBI, part of the European Molecular Biology Laboratory, is a worldwide leader in the storage, analysis and dissemination of large biological datasets. We provide the global research community with access to publicly available databases and tools which are crucial for the advancement of healthcare, food security, and biodiversity.
Join a culture of innovation
We are located on the Wellcome Genome Campus, alongside other prominent research and biotech organisations, and surrounded by beautiful Cambridgeshire countryside. This is a highly collaborative and inclusive community where our employees enjoy a relaxed atmosphere. We are committed to ensuring our employees feel valued, supported and empowered to reach their professional potential. Watch this video to see how EMBL-EBI makes an impact.
Enjoy Lots Of Benefits
Financial incentives: Monthly family, child and non-resident allowances, annual salary review, pension scheme, death benefit, long-term care, accident-at-work and unemployment insurances
Flexible working arrangements - including hybrid working patterns
Private medical insurance for you and your immediate family (including all prescriptions and generous dental & optical cover)
Generous time off: 30 days annual leave per year, in addition public holidays
Relocation package including installation grant (if required)
Campus life: Free shuttle bus to and from work, on-site library, subsidised on-site gym and cafeteria, casual dress code, extensive sports and social club activities (on campus and remotely)
Family benefits: On-site nursery, 10 days of child sick leave, generous parental leave, holiday clubs on campus and monthly family and child allowances
Benefits for non-UK residents: Visa exemption, education grant for private schooling, financial support to travel back to your home country every second year and a monthly non-resident allowance.
For detailed information please visit our employee benefits page here.
What else you need to know
International applicants: We recruit internationally and successful candidates are offered visa exemptions. Please take a look at our International Applicants page for further information.
EMBL is a signatory of DORA. Find out how we apply DORA principles to our recruitment and performance assessment processes here.
Diversity and inclusion: At EMBL, we strongly believe that inclusive and diverse teams benefit from higher levels of innovation and creative thought. We encourage applications from women, LGBTQ+ & individuals from all nationalities.
How to apply: To apply please submit a cover letter and a CV through our online system. We aim to provide a response within two weeks after the closing date.
Closing Date
05/04/2025